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Daniel  J.  Burke
Degree(s): Ph.D.
Graduate School: Johns Hopkins Univ
Primary Appointment: Professor of Biochemistry and Molecular Genetics
Research Interests:
Regulation of mitosis

Email Address: djb6t@virginia.edu


Biomedical Sciences Graduate Program(s)
  • Biochemistry, Molecular Biology and Genetics
  • Microbiology, Immunology and Infectious Diseases
  • Molecular Cell and Developmental Biology

  • Research Description

    My lab studies a mitotic regulatory system that is essential in maintaining
    genomic stability and preventing tumor progression in certain types of
    cancers. We are studying the "spindle checkpoint" in the budding yeast
    Saccharomyces cerevisiae using a combination of genetics, cell biology,
    molecular biology, biochemistry and molecular genetics. The spindle
    checkpoint prevents cells from entering anaphase if even a single chromosome
    is detached from the spindle. Many of the yeast genes that constitute the
    spindle checkpoint have been identified. There are mammalian homologs of
    each, and recent evidence suggests that mutations in some of these genes are
    responsible for genomic instability that accompanies tumor progression in a
    variety of cancer cells. Therefore, this mitotic checkpoint is
    evolutionarily conserved and is vital for maintaining genomic stability in
    organisms from yeast to humans. We have used classical yeast genetics to
    determine that cell cycle arrest via the checkpoint is induced when
    kinetochore function is impaired. This suggests that yeast cells monitor
    kinetochore attachment to the spindle and arrest cell division when
    attachments are incomplete. Recently we have cloned mammalian homologs of
    three of the yeast genes and shown that the checkpoint proteins are
    localized to the kinetochore. This suggests a provocative model where
    localizing checkpoint proteins to the kinetochore may be required to sense
    that chromosomes are detached from the spindle and may be an important
    aspect of generating the inhibitory mitotic signal. We are interested in
    determining the role that the kinetochore plays in spindle checkpoint
    function. We have mapped the sites of interaction within the kinetochore and
    determined that checkpoint function is dependent on a subset of kinetochore
    proteins. We are also investigating the molecular basis for
    kinetochore-microtubule interactions. We have identified kinetochore mutants
    that are defective in attaching chromosomes to the mitotic spindle. We are
    using a genetic approach to identify and characterize the genes responsible
    to elucidate the molecular mechanisms responsible for this critical event in
    the cell cycle. We are also continuing our genetic analysis of the spindle
    checkpoint by looking for new genes required for checkpoint function. We are
    using a dominant mutant that activates the spindle checkpoint as a starting
    point to identify recessive mutants that eliminate checkpoint function. We
    are also using the dominant mutant to identify new genes required to turn
    off the checkpoint when cells enter anaphase. The long-term goal is to have
    a complete molecular description of the checkpoint in both yeast and human
    cells. Some anti-cancer chemotherapies employ compounds like taxol, that
    inhibit cell division by activating the spindle checkpoint. We have
    developed a strain for high throughput screening of chemical compounds that
    inhibit key regulatory components of the cell cycle. We are using strains
    that have temperature sensitive mutations in cell cycle genes and looking
    for synthetic interactions that compromise the growth of the cells. We are
    beginning with cdc20 mutants, because Cdc20 is the target of the spindle
    checkpoint. Our goal is to find compounds, like taxol that are potent
    anti-cancer agents. We have obtained the complete set of deletion mutants of
    every ORF in the yeast genome and have completed a genome-wide screen for
    sensitivity to anti-tubulin drugs. This kind of approach should provide
    novel targets for combination treatments to sensitize cancer cells to
    chemotherapeutic agents. Finally, we are developing new approaches to
    genome-wide screens to identify new genes that interact with the spindle
    checkpoint and the response to this important class of anti-cancer drugs.


    Selected Publications
  • Keyes, B.E and D.J. Burke (2009) Irc15 is a microtubule associated protein that regulates microtubule dynamics in Saccharomyces cerevisiae.  Current Biol. 19:472-478.
  • Kim E.M. and D.J. Burke (2008) DNA damage activates the spindle checkpoint in an ATM/ATR-dependent manner, independently of the kinetochore. PLoS Genetics 4 (2):e1000015.
  • Burke D.J. and P.T. Stukenberg (2008). Linking kinetochore-microtubule binding to the spindle checkpoint. Dev Cell 14:474-9
  • Keyes, B.E. Yellman, C.M., and D.J. Burke. (2008) Differential regulation of APC/C substrates by the spindle assembly checkpoint in Saccharomyces cerevisiae. Genetics 178:589-591
  • PubMed Listings for this Faculty Member

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    Contact Information
      Office Address: PO Box 800733, Jordan Hall, Jordan 6014A, 
      Office Phone: +1 434-982-5482, +1 434-982-5483
      Fax Phone: +1 434-982-4834
      Home Phone: +1 434-295-7072

    Other Websites for this mentor:
    http://people.virginia.edu/~djb6t/LabWeb/index.htm

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